Transcript: ENSDART00000127043.3 ythdf2-201

Description

YTH N(6)-methyladenosine RNA binding protein 2 [Source:NCBI gene;Acc:393220]

Gene Synonyms

yth2, zgc:56224

Location

Chromosome 17: 27,407,918-27,419,319 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 20 domains and features, is associated with 279 variant alleles and maps to 270 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014498.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127043.3	ythdf2-201	3021	613aa	ENSDARP00000107692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1H9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000186773.1	ythdf2-203	2394	612aa	ENSDARP00000150327.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QBD4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000157369.2	ythdf2-202	963	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,021 bps, Translation length: 613 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: E7F1H9

Version

ENSDART00000127043.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000127043.3 ythdf2-201

Summary

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Transcript: ENSDART00000127043.3 ythdf2-201

Summary

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