Transcript: ENSDART00000123527.4 srd5a2a-202

Description

steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]

Gene Synonyms

wu:fk70d02, zgc:109942, zgc:112208

Location

About this transcript

This transcript has 4 exons, is associated with 214 variant alleles and maps to 175 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000064007.5	srd5a2a-201	1155	252aa	ENSDARP00000064006.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q566Z4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123527.4	srd5a2a-202	859	106aa	ENSDARP00000110065.2	Nonsense mediated decay	E9QHW4	-
ENSDART00000140655.2	srd5a2a-203	1630	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 859 bps, Translation length: 106 residues

Version

ENSDART00000123527.4

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.