Transcript: ENSDART00000112930.4

Description

si:ch211-221f10.2 [Source:ZFIN;Acc:ZDB-GENE-140106-124]

Gene Synonyms

zmp:0000001164

Location

Chromosome 14: 23,518,110-23,591,678 forward strand.

About this transcript

This transcript has 30 exons, is annotated with 42 domains and features, is associated with 113 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076547.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112930.4	-	4664	1455aa	ENSDARP00000101153.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAV3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000170473.2	-	4182	1393aa	ENSDARP00000141383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IV86	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000175970.2	-	4107	1368aa	ENSDARP00000144034.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YAM8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 30, Coding exons: 29, Transcript length: 4,664 bps, Translation length: 1,455 residues

Version

ENSDART00000112930.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000112930.4

Summary

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Transcript: ENSDART00000112930.4

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