Transcript: ENSDART00000111392.5 abcd1-201

Description

ATP-binding cassette, sub-family D (ALD), member 1 [Source:NCBI gene;Acc:566367]

Gene Synonyms

zgc:172102

Location

About this transcript

This transcript has 10 exons, is annotated with 19 domains and features, is associated with 832 variant alleles and maps to 76 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111392.5	abcd1-201	2341	766aa	ENSDARP00000101144.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000163232.2	abcd1-202	1992	640aa	ENSDARP00000137751.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A9JRC4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,341 bps, Translation length: 766 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1RBC8

Version

ENSDART00000111392.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.