Transcript: ENSDART00000110041.4 lrrc38a-201

Description

leucine rich repeat containing 38a [Source:ZFIN;Acc:ZDB-GENE-080327-12]

Gene Synonyms

lrrc38, sc:d0332, si:ch211-145d10.6

Location

About this transcript

This transcript has 2 exons, is annotated with 17 domains and features, is associated with 453 variant alleles and maps to 67 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110041.4	lrrc38a-201	1143	290aa	ENSDARP00000103681.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7W4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,143 bps, Translation length: 290 residues

Version

ENSDART00000110041.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.