Transcript: ENSDART00000103182.5 casp6b.2-201

Description

caspase 6b.2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-060312-12]

Gene Synonyms

casp6c, casp6l2, caspase-6c, zgc:136946

Location

About this transcript

This transcript has 6 exons, is annotated with 17 domains and features, is associated with 66 variant alleles and maps to 133 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103182.5	casp6b.2-201	1342	245aa	ENSDARP00000093958.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q29R92	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131808.2	casp6b.2-202	770	254aa	ENSDARP00000113248.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGI8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147512.2	casp6b.2-203	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,342 bps, Translation length: 245 residues

Version

ENSDART00000103182.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.