Transcript: ENSDART00000102304.4 lman1-201

Description

lectin, mannose-binding, 1 [Source:ZFIN;Acc:ZDB-GENE-060201-4]

Gene Synonyms

fc54c09, fi36e01, wu:fc54c09, wu:fi36e01

Location

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 682 variant alleles and maps to 346 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102304.4	lman1-201	2104	513aa	ENSDARP00000093080.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R429	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000192473.1	lman1-203	3598	577aa	ENSDARP00000149320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q848	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000123476.3	lman1-202	300	100aa	ENSDARP00000108644.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWL4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 2,104 bps, Translation length: 513 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000102304.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.