Transcript: ENSDART00000102062.5 timp2b-201

Description

TIMP metallopeptidase inhibitor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2655]

Gene Synonyms

timp2l, zgc:65967, zgc:85799

Location

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 472 variant alleles and maps to 342 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000102062.5	timp2b-201	2938	265aa	ENSDARP00000092838.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NH88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000166855.2	timp2b-202	1989	217aa	ENSDARP00000141124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NUX9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,938 bps, Translation length: 265 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000102062.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.