Transcript: ENSDART00000092277.6 retreg2-201

Description

reticulophagy regulator family member 2 [Source:ZFIN;Acc:ZDB-GENE-061215-128]

Gene Synonyms

fam134a, zgc:158472

Location

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 35 variant alleles and maps to 232 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000092277.6	retreg2-201	2195	545aa	ENSDARP00000086709.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A604	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146473.2	retreg2-203	1298	270aa	ENSDARP00000113102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBE5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000140936.2	retreg2-202	936	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,195 bps, Translation length: 545 residues

Version

ENSDART00000092277.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.