Transcript: ENSDART00000085736.6 prf1.9-201

Description

perforin 1.9 [Source:ZFIN;Acc:ZDB-GENE-131127-344]

Gene Synonyms

prf3a, si:dkeyp-71f10.4, zmp:0000000692

Location

About this transcript

This transcript has 4 exons, is annotated with 19 domains and features, is associated with 241 variant alleles and maps to 156 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000085736.6	prf1.9-201	1807	588aa	ENSDARP00000080171.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F996	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186266.1	prf1.9-202	3672	588aa	ENSDARP00000156709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F996	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,807 bps, Translation length: 588 residues

Version

ENSDART00000085736.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.