Transcript: ENSDART00000080789.6 trpc4a-201

Description

transient receptor potential cation channel, subfamily C, member 4a [Source:ZFIN;Acc:ZDB-GENE-131217-1]

Gene Synonyms

si:dkey-109i21.3, trpc4b

Location

About this transcript

This transcript has 11 exons, is annotated with 35 domains and features, is associated with 622 variant alleles and maps to 67 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080789.6	trpc4a-201	4288	934aa	ENSDARP00000075235.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FGL3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191551.1	trpc4a-202	2820	934aa	ENSDARP00000153505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FGL3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 4,288 bps, Translation length: 934 residues

Version

ENSDART00000080789.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.