Transcript: ENSDART00000080286.6 si:ch1073-396h14.1-201

Description

si:ch1073-396h14.1 [Source:ZFIN;Acc:ZDB-GENE-070705-6]

Gene Synonyms

ADAMLc

Location

Chromosome 22: 15,643,174-15,671,525 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 14 domains and features, is associated with 609 variant alleles and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057590.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000141861.2	si:ch1073-396h14.1-202	1511	504aa	ENSDARP00000121276.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R643	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000080286.6	si:ch1073-396h14.1-201	5233	445aa	ENSDARP00000074736.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5U0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 5,233 bps, Translation length: 445 residues

Version

ENSDART00000080286.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000080286.6 si:ch1073-396h14.1-201

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Transcript: ENSDART00000080286.6 si:ch1073-396h14.1-201

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