Transcript: ENSDART00000074330.5 taf1a-201

Description

TATA box binding protein (TBP)-associated factor, RNA polymerase I, A [Source:ZFIN;Acc:ZDB-GENE-041014-272]

Gene Synonyms

si:ch211-180b22.3, zgc:136232

Location

About this transcript

This transcript has 10 exons, is annotated with 7 domains and features, is associated with 540 variant alleles and maps to 165 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127444.4	taf1a-202	1934	448aa	ENSDARP00000107952.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SP02	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000074330.5	taf1a-201	1635	448aa	ENSDARP00000068819.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SP02	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,635 bps, Translation length: 448 residues

Version

ENSDART00000074330.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.