Transcript: ENSDART00000059230.7 irf2-201

Description

interferon regulatory factor 2 [Source:ZFIN;Acc:ZDB-GENE-041212-38]

Gene Synonyms

irf2b, zgc:103451

Location

About this transcript

This transcript has 9 exons, is annotated with 16 domains and features, is associated with 888 variant alleles and maps to 247 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000059230.7	irf2-201	798	256aa	ENSDARP00000059229.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6T3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167074.2	irf2-203	1829	314aa	ENSDARP00000130583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IBK0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157782.2	irf2-202	1366	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 798 bps, Translation length: 256 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000059230.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.