Transcript: ENSDART00000054807.6 lhx9-201

Description

LIM homeobox 9 [Source:NCBI gene;Acc:550405]

Gene Synonyms

si:dkey-121a9.2, zgc:112196

Location

About this transcript

This transcript has 5 exons, is annotated with 31 domains and features, is associated with 205 variant alleles and maps to 147 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000054807.6	lhx9-201	1650	396aa	ENSDARP00000054806.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000175556.2	lhx9-202	5845	330aa	ENSDARP00000143543.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2U3TWB7	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,650 bps, Translation length: 396 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1LWV4

Version

ENSDART00000054807.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.