Transcript: ENSDART00000043091.8 iqsec1b-201

Description

IQ motif and Sec7 domain ArfGEF 1b [Source:ZFIN;Acc:ZDB-GENE-120813-1]

Gene Synonyms

si:dkey-57n24.7

Location

About this transcript

This transcript has 16 exons, is annotated with 40 domains and features, is associated with 7018 variant alleles and maps to 246 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000043091.8	iqsec1b-201	7336	1252aa	ENSDARP00000043090.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZE5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000153519.3	iqsec1b-202	3405	1134aa	ENSDARP00000127652.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBR0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 7,336 bps, Translation length: 1,252 residues

Version

ENSDART00000043091.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.