Transcript: ENSDART00000015780.8 ercc4-201

Description

excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]

Gene Synonyms

XPF, fancq, fi03a05, wu:fi03a05, zgc:63468

Location

About this transcript

This transcript has 12 exons, is annotated with 16 domains and features, is associated with 540 variant alleles and maps to 117 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000015780.8	ercc4-201	3210	886aa	ENSDARP00000018811.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QK90	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193248.1	ercc4-202	4504	886aa	ENSDARP00000156962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QK90	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,210 bps, Translation length: 886 residues

Version

ENSDART00000015780.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.