Transcript: ENSDART00000015092.9 col1a1b-201

Description

collagen, type I, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4400]

Gene Synonyms

alpha3(I), col1a3, fj59a10, hm:zeh0348, wu:fa95h05, wu:fd02a10, wu:fj59a10

Location

About this transcript

This transcript has 51 exons, is annotated with 52 domains and features, is associated with 1165 variant alleles and maps to 223 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000015092.9	col1a1b-201	5610	1449aa	ENSDARP00000003038.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDL1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 51, Coding exons: 51, Transcript length: 5,610 bps, Translation length: 1,449 residues

Version

ENSDART00000015092.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.