Transcript: ENSDART00000013431.6 hmbsa-201

Description

hydroxymethylbilane synthase a [Source:ZFIN;Acc:ZDB-GENE-040426-1375]

Gene Synonyms

hmbs, zgc:64128

Location

Chromosome 5: 30,520,249-30,534,426 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 19 domains and features, is associated with 706 variant alleles and maps to 201 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000008840.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000013431.6	hmbsa-201	1990	358aa	ENSDARP00000023322.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BFN6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000161836.2	hmbsa-203	1660	361aa	ENSDARP00000136190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQ55	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000132664.3	hmbsa-202	912	247aa	ENSDARP00000112737.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BFN7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,990 bps, Translation length: 358 residues

Version

ENSDART00000013431.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000013431.6 hmbsa-201

Summary

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Transcript: ENSDART00000013431.6 hmbsa-201

Summary

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