Transcript: ENSDART00000172560.2 si:dkey-8l13.5-202

Description

si:dkey-8l13.5 [Source:ZFIN;Acc:ZDB-GENE-141216-349]

Location

About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 408 variant alleles and maps to 56 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000172560.2	si:dkey-8l13.5-202	2299	595aa	ENSDARP00000129956.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PMH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000157609.2	si:dkey-8l13.5-201	1044	347aa	ENSDARP00000137091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,299 bps, Translation length: 595 residues

Version

ENSDART00000172560.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]