Description

aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-070228-2]

Synonyms

SSADH, SSDH

Location
About this transcript

This transcript has 10 exons, is annotated with 9 domains and features, is associated with 1 variation and maps to 1 oligo probe.

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
aldh5a1-201ENSDART000001713514608522aaENSDARP00000133904
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--APPRIS P5

PRINCIPAL5 - APPRIS candidate principal isoform (longest coding sequence).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

aldh5a1-001ENSDART000001090871918426aaENSDARP00000102596
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
F1QE89 NM_001110468
NP_001103938
aldh5a1-003ENSDART000001315161823480aaENSDARP00000113407
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
F1R9T0 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

aldh5a1-002ENSDART00000135997539No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 10 Coding exons: 10 Transcript length: 1,823 bps Translation length: 480 residues

Ensembl version

ENSDART00000131516.2

Type

Novel protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays