Description

paired box 6b [Source:ZFIN;Acc:ZDB-GENE-001031-1]

Synonyms

cb566, fc09c10, id:ibd5095, Pax6.2, sri(l), wu:fc09c10, wu:fc33g08

AN, AN2, D11S812E, WAGR

Location
About this transcript

This transcript has 6 exons, is annotated with 10 domains and features and is associated with 1 variation.

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
pax6b-001ENSDART000001459464993437aaENSDARP00000115545
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
Q9YHZ8 NP_571716
APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

pax6b-202ENSDART000001657574959450aaENSDARP00000136269
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--APPRIS P5

PRINCIPAL5 - APPRIS candidate principal isoform (longest coding sequence).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

pax6b-201ENSDART000000145721560382aaENSDARP00000019067
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
F1QKK6 -
pax6b-005ENSDART0000014476557899aaENSDARP00000113616
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
A2BDM0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
pax6b-009ENSDART00000163323571134aaENSDARP00000141728
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
pax6b-003ENSDART0000014670455768aaENSDARP00000116680
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
A2BDM1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
pax6b-004ENSDART0000013469639481aaENSDARP00000115187
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
A2BDM0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
pax6b-006ENSDART00000137235683No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
pax6b-007ENSDART00000138689681No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
pax6b-008ENSDART00000161608830No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 6 Coding exons: 5 Transcript length: 578 bps Translation length: 99 residues

Ensembl version

ENSDART00000144765.3

Type

Putative protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays