Description

aryl hydrocarbon receptor nuclear translocator-like 1b [Source:ZFIN;Acc:ZDB-GENE-030408-1]

Synonyms

bmal1b, zfBMAL3

bHLHe5, BMAL1, JAP3, MOP3, PASD3

Location
About this transcript

This transcript has 20 exons, is annotated with 34 domains and features, is associated with 12 variations and maps to 1 oligo probe.

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
arntl1b-002ENSDART000001045232400645aaENSDARP00000095296
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
A4IG25 -
arntl1b-202ENSDART000000982592398646aaENSDARP00000089031
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
E7F4H0 -APPRIS P5

PRINCIPAL5 - APPRIS candidate principal isoform (longest coding sequence).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

arntl1b-201ENSDART000000518232329623aaENSDARP00000051822
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
F1Q584 -
arntl1b-001ENSDART000001392271869622aaENSDARP00000114569
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
Q8JIG1 NM_178300
NP_840085
arntl1b-003ENSDART000001478371210No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
arntl1b-004ENSDART00000133011815No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 20 Coding exons: 18 Transcript length: 2,400 bps Translation length: 645 residues

Ensembl version

ENSDART00000104523.5

Type

Novel protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays