Description

aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]

Synonyms

FHA-HIT

AOA, AOA1, AXA1, EAOH, EOAHA, FLJ20157

Location
About this transcript

This transcript has 8 exons, is annotated with 11 domains and features, is associated with 10 variations and maps to 1 oligo probe.

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
aptx-201ENSDART000001658251401324aaENSDARP00000131911
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-NP_999894
APPRIS P5

PRINCIPAL5 - APPRIS candidate principal isoform (longest coding sequence).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

aptx-001ENSDART000000292521303324aaENSDARP00000035368
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
B8A444 NP_999894
APPRIS P5

PRINCIPAL5 - APPRIS candidate principal isoform (longest coding sequence).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

aptx-003ENSDART00000150862797247aaENSDARP00000125307
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
H0WEM9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
aptx-002ENSDART00000150568867No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 8 Coding exons: 8 Transcript length: 1,303 bps Translation length: 324 residues

Ensembl version

ENSDART00000029252.6

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays