Description

ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]

Synonyms

acc, accordion, cb279, serca, serca1, wu:cegs655, wu:fb17h11, wu:fb19b10, zgc:92110

Location
About this transcript

This transcript has 24 exons, is annotated with 41 domains and features, is associated with 3 variations and maps to 3 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
atp2a1-201ENSDART000001625463497994aaENSDARP00000135633
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

atp2a1-001ENSDART0000004393233901005aaENSDARP00000043931
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
Q5U3A4 -APPRIS P5

PRINCIPAL5 - APPRIS candidate principal isoform (longest coding sequence).

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

atp2a1-002ENSDART000001295613311994aaENSDARP00000109874
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
Q642Z0 NM_001007029
NP_001007030
APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

atp2a1-006ENSDART000001346471049103aaENSDARP00000115435
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
E9QGF0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
atp2a1-007ENSDART0000014697950239aaENSDARP00000116177
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
E9QCD9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
atp2a1-005ENSDART0000014626741698aaENSDARP00000116872
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
E9QF60 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
atp2a1-004ENSDART00000139579348No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
atp2a1-003ENSDART00000148365520No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 24 Coding exons: 23 Transcript length: 3,311 bps Translation length: 994 residues

Ensembl version

ENSDART00000129561.2

Type

Known protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays