Description

ATPase, Na+/K+ transporting, alpha 1a polypeptide, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-001212-1]

Synonyms

atp1a1, atp[a]1B1, cb70, had, heart and mind, snakehead, snk, wu:fa03c03, wu:fb92h10

Location
About this transcript

This transcript has 22 exons, is annotated with 52 domains and features, is associated with 38 variations and maps to 5 oligo probes.

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
atp1a1a.1-001ENSDART0000008104735061028aaENSDARP00000075490
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
Q9DGL6 NM_131686
NP_571761
APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

atp1a1a.1-201ENSDART0000016178133631026aaENSDARP00000137542
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
atp1a1a.1-002ENSDART00000135994867No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
atp1a1a.1-005ENSDART00000137184652No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
atp1a1a.1-003ENSDART00000136381416No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
atp1a1a.1-004ENSDART00000147682313No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
atp1a1a.1-006ENSDART00000132968772No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 22 Coding exons: 22 Transcript length: 3,506 bps Translation length: 1,028 residues

Ensembl version

ENSDART00000081047.4

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays