Transcript: ENSDART00000123207.3 tdg.2-201

Description

thymine DNA glycosylase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-131121-30]

Gene Synonyms

si:ch211-68a17.8, tgd.2

Location

Chromosome 25: 18,954,189-18,965,502 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 27 variant alleles and maps to 86 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000086450.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155610.3	tdg.2-203	4349	400aa	ENSDARP00000127725.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WBY3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000123207.3	tdg.2-201	5370	399aa	ENSDARP00000105235.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F5Y8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000154291.2	tdg.2-202	760	212aa	ENSDARP00000128091.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WCZ4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 5,370 bps, Translation length: 399 residues

Version

ENSDART00000123207.3

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000123207.3 tdg.2-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000123207.3 tdg.2-201

Summary

About Us

Get help

Our sister sites

Follow us