Transcript: ENSDART00000135997.2 aldh5a1-203

Description

aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-070228-2]

Location

About this transcript

This transcript has 3 exons, is associated with 141 variant alleles and maps to 74 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131516.3	aldh5a1-202	1823	480aa	ENSDARP00000113407.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9T0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000109087.3	aldh5a1-201	1918	426aa	ENSDARP00000102596.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QE89	-
ENSDART00000171351.2	aldh5a1-204	1713	522aa	ENSDARP00000133904.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIB7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135997.2	aldh5a1-203	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 539 bps,

Version

ENSDART00000135997.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.