Transcript: ENSDART00000062556.4 sod2-201

Description

superoxide dismutase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-7742]

Gene Synonyms

Mn-SOD, cb463, sod(Mn), wu:fj33b01

Location

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 386 variant alleles and maps to 220 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062556.4	sod2-201	956	224aa	ENSDARP00000062555.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P980	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152990.3	sod2-202	982	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000153344.2	sod2-204	780	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000153069.3	sod2-203	644	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 956 bps, Translation length: 224 residues

Version

ENSDART00000062556.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.