Transcript: ENSDART00000003690.9 acana-201

Description

aggrecan a [Source:ZFIN;Acc:ZDB-GENE-050208-221]

Gene Synonyms

agc1, agca, im:7146049

Location

About this transcript

This transcript has 19 exons, is annotated with 79 domains and features, is associated with 585 variant alleles and maps to 551 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000003690.9	acana-201	6000	1547aa	ENSDARP00000024325.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000017467.9	acana-202	4908	1509aa	ENSDARP00000006674.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F537	-

Summary

Statistics

Exons: 19, Coding exons: 18, Transcript length: 6,000 bps, Translation length: 1,547 residues

Version

ENSDART00000003690.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]