Transcript: ENSDART00000133951.2 arhgef18a-202

Description

rho/rac guanine nucleotide exchange factor (GEF) 18a [Source:ZFIN;Acc:ZDB-GENE-040516-14]

Gene Synonyms

arhgef18, wu:fc21e04, wu:fj05f11, zgc:85686

Location

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 131 variant alleles and maps to 129 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025841.9	arhgef18a-201	4184	940aa	ENSDARP00000016874.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1REH9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143496.3	arhgef18a-203	554	73aa	ENSDARP00000121888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEI1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133951.2	arhgef18a-202	389	68aa	ENSDARP00000112773.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEP7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 389 bps, Translation length: 68 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000133951.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.