Transcript: ENSDART00000026088.7 asb2a.1-201

Description

ankyrin repeat and SOCS box containing 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5355]

Gene Synonyms

asb2a, si:dkey-85n7.4, wu:fd14e12

Location

Chromosome 20: 27,295,701-27,311,675 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 47 domains and features, is associated with 457 variant alleles and maps to 108 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000003797.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000148361.4	asb2a.1-202	3957	689aa	ENSDARP00000117664.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QY53	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000026088.7	asb2a.1-201	5237	672aa	ENSDARP00000021808.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F984	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000153448.2	asb2a.1-204	651	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000153184.2	asb2a.1-203	345	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 5,237 bps, Translation length: 672 residues

Version

ENSDART00000026088.7

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000026088.7 asb2a.1-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000026088.7 asb2a.1-201

Summary

About Us

Get help

Our sister sites

Follow us