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Zebrafish (GRCz11)

Search Zebrafish (Danio rerio)

Genome assembly: GRCz11 (GCA_000002035.4)

More information and statistics

Download DNA sequence (FASTA)

Convert your data to GRCz11 coordinates

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Other assemblies

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download FASTA files for genes, cDNAs, ncRNA, proteins

Download GTF or GFF3 files for genes, cDNAs, ncRNA, proteins

Update your old Ensembl IDs

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analysis

Download alignments (EMF)

Variation

What can I find? Short sequence variants and longer structural variants; disease and other phenotypes

More about variation in Ensembl

Download all variants (GVF)

Variant Effect Predictor

Regulation

What can I find? Microarray annotations.

More about the Ensembl microarray annotation strategy

About this species