Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: utp6 ENSDARG00000098433

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Description

UTP6 small subunit processome component [Source:ZFIN;Acc:ZDB-GENE-040426-769]

Gene Synonyms

zgc:55648

Location

Chromosome 6: 18,524,444-18,531,760 reverse strand.

GRCz11:CM002890.2

About this gene

This gene has 5 transcripts (splice variants) and 219 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169780.2	utp6-205	2014	594aa	ENSDARP00000134857.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IGM5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160693.2	utp6-201	732	226aa	ENSDARP00000141893.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IXD3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167167.2	utp6-204	622	181aa	ENSDARP00000134361.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IKF5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000163306.2	utp6-203	782	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000162148.2	utp6-202	433	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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