Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: zgc:173709 ENSDARG00000090160

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Description

zgc:173709 [Source:NCBI gene (formerly Entrezgene);Acc:100002234]

Location

Chromosome 4: 49,821,234-49,952,636 reverse strand.

GRCz11:CM002888.2

About this gene

This gene has 6 transcripts (splice variants), 79 orthologues and 372 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150746.3	zgc:173709-201	4412	1310aa	ENSDARP00000125566.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q1V3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183761.1	zgc:173709-203	5172	228aa	ENSDARP00000154589.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000185921.1	zgc:173709-204	2810	693aa	ENSDARP00000156631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190248.1	zgc:173709-205	2425	759aa	ENSDARP00000146475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000190750.1	zgc:173709-206	2221	693aa	ENSDARP00000153506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000157941.2	zgc:173709-202	1784	383aa	ENSDARP00000131578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8KBM3	-

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Summary

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