Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: jcada ENSDARG00000089871

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Description

junctional cadherin 5 associated a [Source:ZFIN;Acc:ZDB-GENE-111221-2]

Gene Synonyms

gb:eb954612, si:ch211-203c7.2

Location

Chromosome 12: 23,762,966-23,796,707 forward strand.

GRCz11:CM002896.2

About this gene

This gene has 2 transcripts (splice variants) and 71 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152942.2	jcada-201	7454	1465aa	ENSDARP00000127138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAR1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181725.1	jcada-202	7745	1465aa	ENSDARP00000151002.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAR1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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