Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cd44a ENSDARG00000087863

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Description

CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]

Gene Synonyms

cd44, fa99e04, wu:fa99e04

Location

Chromosome 7: 49,882,750-49,892,991 reverse strand.

GRCz11:CM002891.2

About this gene

This gene has 2 transcripts (splice variants), 142 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126240.3	cd44a-201	1782	392aa	ENSDARP00000110970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6T0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174188.2	cd44a-202	540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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