Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:ch211-230g15.5 ENSDARG00000079167

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Description

si:ch211-230g15.5 [Source:ZFIN;Acc:ZDB-GENE-091204-280]

Location

Chromosome 24: 26,379,441-26,430,823 forward strand.

GRCz11:CM002908.2

About this gene

This gene has 5 transcripts (splice variants), 94 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110011.4	si:ch211-230g15.5-201	4771	896aa	ENSDARP00000100341.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FEN0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133684.3	si:ch211-230g15.5-202	3380	896aa	ENSDARP00000117842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FEN0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137786.3	si:ch211-230g15.5-205	425	118aa	ENSDARP00000115475.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGD8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000136889.2	si:ch211-230g15.5-204	672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000136109.2	si:ch211-230g15.5-203	579	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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