Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: atp13a3 ENSDARG00000076622

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Description

ATPase 13A3 [Source:ZFIN;Acc:ZDB-GENE-120521-1]

Location

Chromosome 11: 34,116,734-34,188,346 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues and 26 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173216.2	atp13a3-203	3041	471aa	ENSDARP00000142073.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LFQ0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181571.1	atp13a3-205	914	81aa	ENSDARP00000155483.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RXP8	-
ENSDART00000172978.2	atp13a3-201	748	136aa	ENSDARP00000142072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LFP9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173275.2	atp13a3-204	294	97aa	ENSDARP00000142400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGM1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173039.2	atp13a3-202	207	69aa	ENSDARP00000142383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140LGK4	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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