Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: traj39 ENSDARG00000075807

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Description

T-cell receptor alpha joining 39 [Source:ZFIN;Acc:ZDB-GENE-170601-47]

Gene Synonyms

si:dkey-161l11.26, zmp:0000000779

Location

Chromosome 2: 36,114,192-36,157,913 forward strand.

GRCz11:CM002886.2

About this gene

This gene has 2 transcripts (splice variants), 1 orthologue and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113547.3	traj39-201	903	130aa	ENSDARP00000099340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RBR2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000159055.2	traj39-202	66	22aa	ENSDARP00000136649.1	Joining chain T cell receptor gene that undergoes somatic recombination before transcriptionTR J gene	A0A0R4IQJ6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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