Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cnot2 ENSDARG00000061802

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Description

CCR4-NOT transcription complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070410-70]

Gene Synonyms

zgc:162316

Location

Chromosome 25: 28,678,851-28,713,510 forward strand.

GRCz11:CM002909.2

About this gene

This gene has 4 transcripts (splice variants), 262 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000088383.7	cnot2-201	2233	520aa	ENSDARP00000082816.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QN63	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000139965.3	cnot2-203	693	173aa	ENSDARP00000112926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QCV7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134072.2	cnot2-202	566	110aa	ENSDARP00000117431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE21	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000148366.2	cnot2-204	563	188aa	ENSDARP00000118983.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q7P0	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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