Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rbm38 ENSDARG00000058818

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Description

RNA binding motif protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-5923]

Gene Synonyms

fi25e12, rnpc1, wu:fi25e12, zgc:92336

Location

Chromosome 23: 6,586,467-6,632,106 forward strand.

GRCz11:CM002907.2

About this gene

This gene has 2 transcripts (splice variants), 190 orthologues and 28 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081763.6	rbm38-201	2393	234aa	ENSDARP00000076202.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZVC7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000121480.3	rbm38-202	877	210aa	ENSDARP00000111830.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QB16	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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