Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:dkey-11m19.5 ENSDARG00000058416

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Description

si:dkey-11m19.5 [Source:ZFIN;Acc:ZDB-GENE-120709-97]

Location

Chromosome 11: 12,879,635-12,955,738 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 3 transcripts (splice variants), 177 orthologues and 16 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000182515.1	si:dkey-11m19.5-203	13908	4344aa	ENSDARP00000146298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R672	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000081296.5	si:dkey-11m19.5-201	13810	4344aa	ENSDARP00000075739.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R672	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152007.3	si:dkey-11m19.5-202	8010	2670aa	ENSDARP00000126534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DYK5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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