Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cdc27 ENSDARG00000056258

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Description

cell division cycle 27 [Source:ZFIN;Acc:ZDB-GENE-990706-2]

Gene Synonyms

wu:fb54g06, wu:fc88c12

Location

Chromosome 3: 22,035,863-22,057,600 forward strand.

GRCz11:CM002887.2

About this gene

This gene has 5 transcripts (splice variants), 217 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132190.3	cdc27-201	3774	833aa	ENSDARP00000113979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5X3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000177169.2	cdc27-205	6059	809aa	ENSDARP00000144347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YBJ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000147721.2	cdc27-204	275	67aa	ENSDARP00000123423.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC20	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143197.2	cdc27-203	763	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000139384.2	cdc27-202	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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