Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: bco2a ENSDARG00000055722

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Description

beta-carotene oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8039]

Gene Synonyms

bco2b, fj48c03, wu:fj48c03

Location

Chromosome 5: 30,052,714-30,080,332 reverse strand.

GRCz11:CM002889.2

About this gene

This gene has 3 transcripts (splice variants), 212 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133981.3	bco2a-201	6142	572aa	ENSDARP00000113898.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QU45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140049.3	bco2a-202	1055	142aa	ENSDARP00000138644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQ01	-
ENSDART00000147963.3	bco2a-203	830	256aa	ENSDARP00000120758.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBA0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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