Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: mmp15a ENSDARG00000051959

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Description

matrix metallopeptidase 15a [Source:ZFIN;Acc:ZDB-GENE-070817-4]

Location

Chromosome 25: 17,581,393-17,587,860 reverse strand.

GRCz11:CM002909.2

About this gene

This gene has 2 transcripts (splice variants), 122 orthologues and 30 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000073679.6	mmp15a-201	1580	334aa	ENSDARP00000068169.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QYY1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146851.2	mmp15a-202	843	200aa	ENSDARP00000120549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0J9YIY9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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