Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rnaseh1 ENSDARG00000042571

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Description

ribonuclease H1 [Source:ZFIN;Acc:ZDB-GENE-040718-407]

Gene Synonyms

zgc:91971

Location

Chromosome 20: 30,378,803-30,385,570 forward strand.

GRCz11:CM002904.2

About this gene

This gene has 4 transcripts (splice variants) and 216 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062441.5	rnaseh1-201	1281	276aa	ENSDARP00000062440.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG94	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000169140.3	rnaseh1-204	1117	276aa	ENSDARP00000140924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DG94	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148242.4	rnaseh1-202	835	241aa	ENSDARP00000117677.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZA7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153019.2	rnaseh1-203	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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