Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: hnrnpa1b ENSDARG00000036675

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Description

heterogeneous nuclear ribonucleoprotein A1b [Source:ZFIN;Acc:ZDB-GENE-030912-14]

Gene Synonyms

hnrnpa1, hnrpa1

Location

Chromosome 23: 36,306,539-36,310,418 forward strand.

GRCz11:CM002907.2

About this gene

This gene has 4 transcripts (splice variants), 544 orthologues and 46 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000053267.6	hnrnpa1b-201	1564	403aa	ENSDARP00000053266.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QFV2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131711.2	hnrnpa1b-203	620	65aa	ENSDARP00000119496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2T6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000134607.2	hnrnpa1b-204	473	120aa	ENSDARP00000121434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4I4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000127174.4	hnrnpa1b-202	1005	281aa	ENSDARP00000108932.2	Nonsense mediated decay	F1QS20	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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