Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ccdc78 ENSDARG00000030095

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Description

coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]

Location

Chromosome 24: 37,902,687-37,921,940 forward strand.

GRCz11:CM002908.2

About this gene

This gene has 2 transcripts (splice variants), 141 orthologues and is associated with 12 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042273.9	ccdc78-201	4375	547aa	ENSDARP00000042272.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F7G2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155476.2	ccdc78-202	695	177aa	ENSDARP00000129850.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WHY5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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