Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: tspan9a ENSDARG00000025299

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Description

tetraspanin 9a [Source:ZFIN;Acc:ZDB-GENE-060503-632]

Gene Synonyms

si:dkey-261a10.1, tspan9

Location

Chromosome 18: 11,016,203-11,317,187 reverse strand.

GRCz11:CM002902.2

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and 51 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000040500.8	tspan9a-201	1011	336aa	ENSDARP00000040499.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QR74	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000180442.1	tspan9a-203	1100	239aa	ENSDARP00000149560.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QCX0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146692.2	tspan9a-202	683	227aa	ENSDARP00000123336.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QIF8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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